Schedule for the single-cell RNA-seq data analysis workshop

Pre-reading

Day 1

Time Topic Instructor
09:30 - 09:45 Workshop introduction Radhika
09:45 - 11:00 Single-cell RNA-seq design and methods Dr. Luciano Martelotto
11:00 - 11:20 scRNA-seq pre-reading discussion Meeta
11:20 - 12:00 Quality control set-up Jihe

Self Learning #1

Assignment #1


Day 2

Time Topic Instructor
09:30 - 10:45 Self-learning lessons discussion Meeta/Jihe
10:45 - 12:00 Integration Radhika

Self Learning #2

Assignment #2


Day 3

Time Topic Instructor
09:30 - 10:30 Self-learning lessons discussion All
10:30 - 10:45 Workflow summary Meeta
10:45 - 11:30 Discussion, Final Q & A All
11:30 - 12:00 Wrap up Radhika

Resources

We have covered the analysis steps in quite a bit of detail for scRNA-seq exploration of cellular heterogeneity using the Seurat package. For more information on topics covered, we encourage you to take a look at the following resources:

Building on this workshop