Current Topics in Bioinformatics workshops

This repository has teaching materials for 2-3 hour, hands-on workshops covering a variety of topics related to bioinformatics data analysis. The workshops will lead participants through performing different types of analyses using R/RStudio or Linux.

Some workshops will require a working knowledge of R or completion of the Introduction to R workshop. Other workshops will require a working knowledge of the bash scripting language or completion of the Introduction to Unix workshop.

** NOTE: Detailed information and preparation instructions for each of the workshops can be found by clicking on the workshop links in the table below.

These materials are developed for a trainer-led workshop, but also amenable to self-guided learning.

Workshops

Lessons Prerequisites
Introduction to R None
Visualization in R Beginner R or IntroR workshop
Functional analysis of gene lists Beginner R or IntroR workshop
Reproducible research using R (Rmarkdown: report generation) Beginner R or IntroR workshop

These materials have been developed by members of the teaching team at the Harvard Chan Bioinformatics Core (HBC). These are open access materials distributed under the terms of the Creative Commons Attribution license (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.